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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9758682
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISLMKFLF LGIWVYYYSV LDSVSAMDSL LSPKGVNYEV AALMSVKNKM KDEKEVLSGW  60
   61 DINSVDPCTW NMVGCSSEGF VVSLLLQNNQ LTGPIPSELG QLSELETLDL SGNRFSGEIP 120
  121 ASLGFLTHLN YLRLSRNLLS GQVPHLVAGL SGLSFLIVGN AFLCGPASQE LCSDATPVRN 180
  181 ATGLSEKDNS KHHSLVLSFA FGIVVAFIIS LMFLFFWVLW HRSRLSRSHV QQDYEFEIGH 240
  241 LKRFSFREIQ TATSNFSPKN ILGQGGFGMV YKGYLPNGTV VAVKRLKDPI YTGEVQFQTE 300
  301 VEMIGLAVHR NLLRLFGFCM TPEERMLVYP YMPNGSVADR LRDNYGEKPS LDWNRRISIA 360
  361 LGAARGLVYL HEQCNPKIIH RDVKAANILL DESFEAIVGD FGLAKLLDQR DSHVTTAVRG 420
  421 TIGHIAPEYL STGQSSEKTD VFGFGVLILE LITGHKMIDQ GNGQVRKGMI LSWVRTLKAE 480
  481 KRFAEMVDRD LKGEFDDLVL EEVVELALLC TQPHPNLRPR MSQVLKVLEG LVEQCEGGYE 540
  541 ARAPSVSRNY SNGHEEQSFI IEAIELSGPR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle