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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149040719, gi...
Protein type: Transmembrane
Type Confidence: 0.49
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLKGETSR IAGLAVTLAK PNSTSSFSPS VQCPNDGFGI YSNSYGPEFA HCKKTLWNEL  60
   61 GNGLAYDDFS FPIFLLEDEN ETKVIKQCYQ DHNLGQNGSA PSFPLCAMQL FSHMHAVIST 120
  121 ATCMRRSFIQ STFSINPEIV CDPLSDYNVW SMLKPINTSG GLEPDVRVVV AATRLDSRSF 180
  181 FWNVAPGAES AVASFVTQLA AAEALHKAPD VTTLPRNVMF VFFQGETFDY IGSSRMVYDM 240
  241 ENGKFPVRLE NIDSFVELGQ VALRTSLELW MHTDPMSQKN ESVKNQVEDL LVTLEQSGAD 300
  301 TPQVVLSRLV QSQALPPSSL QRFLRARNIS GVVLADHSGS FHNRYYQSIY DTAENINVTY 360
  361 PESQSPEEDL NFVTDTAKAL ADVATVLARA LYKLAGGTNF NNSIQADPQT VTRLLYGFLV 420
  421 RANNSWFQSI LRHDLRSYLD DGPLQHYIAV SSPTNTTYVV QYALANLTGK VTNLTQEQCQ 480
  481 DPSKVPNESK DLYEYSWVQG PWNSNKTERL PRCVRSTVRL ARALSPAFEL SQWSSTEYST 540
  541 WAESRWKDIQ ARIFLIASKE LEFITLIVGF SILVFSLIVT YCINAKADVL FVAPREPGAV 600
  601 SY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle