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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4262228, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASLIIFVA LLCNVTVISG LNDEGFALLT FKQSVHDDPT GSLNNWNSSD ENACSWNGVT  60
   61 CKELRVVSLS IPRKNLYGSL PSSLGFLSSL RHLNLRSNRF YGSLPIQLFH LQGLQSLVLY 120
  121 GNSFDGSLSE EIGKLKLLQT LDLSQNLFNG SLPLSILQCN RLKTLDVSRN NLSGPLPDGF 180
  181 GSAFVSLEKL DLAFNQFNGS IPSDIGNLSN LQGTADFSHN HFTGSIPPAL GDLPEKVYID 240
  241 LTFNNLSGPI PQTGALMNRG PTAFIGNTGL CGPPLKDLCQ GYQLGLNASY PFIPSNNPPE 300
  301 DSDSTNSETK QKSSGLSKSA VIAIVLCDVF GICLVGLLFT YCYSKFCACN RENQFGVEKE 360
  361 SKKRASECLC FRKDESETPS ENVEHCDIVP LDAQVAFNLE ELLKASAFVL GKSGIGIVYK 420
  421 VVLENGLTLA VRRLGEGGSQ RFKEFQTEVE AIGKLKHPNI ASLRAYYWSV DEKLLIYDYV 480
  481 SNGNLATALH GKPGMMTIAP LTWSERLRIM KGIATGLVYL HEFSPKKYVH GDLKPSNILI 540
  541 GQDMEPKISD FGLARLANIA GGSSPTIQSN RIIQTDQQPQ ERQQHHHKSV SSEFTAHSSS 600
  601 GSYYQAPETL KMVKPSQKWD VYSYGIILLE LIAGRSPAVE VGTSEMDLVR WVQVCIEEKK 660
  661 PLCDVLDPCL APEAETEDEI VAVLKIAISC VNSSPEKRPT MRHVSDTLDR LPVAGD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle