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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB2G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE  60
   61 SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF TDLTYSVKIQ KKFNPLACCR 120
  121 RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN 180
  181 GEVLESSMQK VISAYVMQDD LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL 240
  241 GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL 300
  301 QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE 360
  361 NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN NNKRNTNVSS LKEAITASIS 420
  421 RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG 480
  481 IILATMFTNL DNSPKGAQER LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR 540
  541 SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL 600
  601 SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ 660
  661 NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN VTAETCVTTG IDILKQQGIT 720
  721 DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle