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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MNS1_ARATH
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN  60
   61 EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK VKEAMIHAWS SYEKYAWGKD 120
  121 ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET 180
  181 TIRVVGGLLS AYDLSGDKMF LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA 240
  241 GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP 300
  301 SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI 360
  361 CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS LAGELAWTCY NFYQSTPTKL 420
  421 AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE 480
  481 SGYVGLKDVN TGAKDNKMQS FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN 540
  541 DPRKPTIALR QRKFGHQINV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle