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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4220455, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIITTHKRDI NLLVLQLGAA LAVSFAGFLF ARFRKNTKRI GPTLPPLPPH SSDNGYRDYS  60
   61 NKSIDRRDEG TEKTDEETLI GVSPRRECDL DEKDVFLLPE FEEEAKKLDL LVCDDCETPR 120
  121 SDITAPLAFP SEEEADHENE INRLRNTVRA LRERERCLED KLLEYYSLKE QQKIAMELRS 180
  181 RLKLNQMETK VFNFKIKKLQ AENEKLKAEC FEHSKVLLEL DMAKSQVQVL KKKLNINTQQ 240
  241 HVAQILSLKQ RVARLQEEEI KAVLPDLEAD KMMQRLRDLE SEINELTDTN TRLQFENFEL 300
  301 SEKLESVQII ANSKLEEPEE IETLREDCNR LRSENEELKK DVEQLQGDRC TDLEQLVYLR 360
  361 WINACLRYEL RTYQPPAGKT VARDLSTTLS PTSEEKAKQL ILEYAHSEDN TDYDRWSSSQ 420
  421 EESSMITDSM FLDDSSVDTL FATKTKKTGK KKLMHKLMKI LHGKDTKDSK KRAGSSEPSS 480
  481 SNTGVHSTPR QLRSTHSMDF QMLMRGKDEE EDFKNHIVML RRKSEAAGSS TYGEEHCLET 540
  541 DQNGKKELIK LADALTKSRS TKKLHKKSVS FFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle