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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP14_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSWIPKLLL LQLVLLLTKH ADSSSIIKYL PGFEGPLPFE LETGYIGVGD EDEDQMFYYF  60
   61 IKSESNPEED PLLVWLSGGP GCSSFTGLVY ENGPLGFKVE AYNGSIPTLV STTYSWTKVA 120
  121 NIIYLDQPVG AGFSYSRNPF ADRPSDTGSA KLVNEFVRKW LAKHPDYFSN PFYVTGNSYS 180
  181 GKVIPAIVQE ISNGNYICCK PQINLQGYVI GNPVAYYDHD KDSRIPFAHG VALISDELFE 240
  241 SLKRSCGGSY SIVDPLNTEC LKLIKDYHKC VSGIYQELIL KPKCETTSPD CYTYRYLLSI 300
  301 YWANNEIVRR ALKVVEGSKG KWERCDLSVR SNQDIKSSIP YHMNNSIKGY RSLVISGDHD 360
  361 MTIPFLGTQA WIRSLNYSIT EKWRPWMILD QVAGYTKTYA NKMTLATVKG GGHTLEYKPE 420
  421 ENSILFKRWI SGQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle