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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157817947, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKIRPLKKY PVDLYYLVDV SASMHNNIEK LNSVGNDLSK KMALFSHDFR LGFGSYVDKT  60
   61 VSPYISIHPE RIHNQCSDYN LDCMPPHGYI HVLSLTENIT EFEKAVHRQK ISGNIDTPEG 120
  121 GFDAMLQAAV CESHIGWRKE AKRLLLVMTD QTSHLALDSK LAGIVVPNDG NCHLKNNVYV 180
  181 KSTTMEHPSL GQLSEKLIDN NINVIFAVQG KQFHWYKDLL PLLPGAIAGE IESKAANLNN 240
  241 LVVEAYKVLF NVTVVMKTCD IIGGKNYAII KPIGFNETTK VHIHRSCSCQ CEDHRGLKGQ 300
  301 CAEAAPDPKC PQCDDGKCHF DEDQFPSEAC KPQEDQPVCS GRGVCICGKC LCHKTKLGRV 360
  361 YGQYCEKDDF SCPYLHGDVC SGHGECEGGR CQCFNGWEGD RCQCPSASAQ HCVNSKGQVC 420
  421 SGRGTCVCGR NCLQCLHPHN LSQAVLDQCK ASCAVMEQHP VAQTSECLSG PSYLRIFFII 480
  481 FIVTFLIGLL KVLIIRQVIL QWNSNKIKSS SDYRVSASKK DKLILQSVCT RAVTYRREKP 540
  541 EEIKMDISKL NAQEAFRCNF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle