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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HRD3A_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILSYGIVI LSLLVFSFIE FGVHARPVVL VLSNDDLNSG GDDNGVGESS DFDEFGESEP  60
   61 KSEEELDPGS WRSIFEPDDS TVQAASPQYY SGLKKILSAA SEGNFRLMEE AVDEIEAASS 120
  121 AGDPHAQSIM GFVYGIGMMR EKSKSKSFLH HNFAAAGGNM QSKMALAFTY LRQDMHDKAV 180
  181 QLYAELAETA VNSFLISKDS PVVEPTRIHS GTEENKGALR KSRGEEDEDF QILEYQAQKG 240
  241 NANAMYKIGL FYYFGLRGLR RDHTKALHWF LKAVDKGEPR SMELLGEIYA RGAGVERNYT 300
  301 KALEWLTLAA KEGLYSAFNG IGYLYVKGYG VDKKNYTKAR EYFEKAVDNE DPSGHYNLGV 360
  361 LYLKGIGVNR DVRQATKYFF VAANAGQPKA FYQLAKMFHT GVGLKKNLEM ATSFYKLVAE 420
  421 RGPWSSLSRW ALEAYLKGDV GKALILYSRM AEMGYEVAQS NAAWILDKYG ERSMCMGVSG 480
  481 FCTDKERHER AHSLWWRASE QGNEHAALLI GDAYYYGRGT ERDFVRAAEA YMHAKSQSNA 540
  541 QAMFNLGYMH EHGQGLPFDL HLAKRYYDES LQSDAAARLP VTLALASLWL RRNYADTVLV 600
  601 RVVDSLPEVY PKVETWIENV VFEEGNATIL TLFVCLITIL YLRERQRRQV VVVADPVAAD 660
  661 VAQPLDADVA QHLAAFPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle