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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GUX1_ARATH
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK  60
   61 NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS HSSSRWIWRR QDPRYFSDLD 120
  121 INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT 180
  181 WDALYPEWID EEQETEVPVC PNIPNIKVPT RRLDLIVVKL PCRKEGNWSR DVGRLHLQLA 240
  241 AATVAASAKG FFRGHVFFVS RCFPIPNLFR CKDLVSRRGD VWLYKPNLDT LRDKLQLPVG 300
  301 SCELSLPLGI QDRPSLGNPK REAYATILHS AHVYVCGAIA AAQSIRQSGS TRDLVILVDD 360
  361 NISGYHRSGL EAAGWQIRTI QRIRNPKAEK DAYNEWNYSK FRLWQLTDYD KIIFIDADLL 420
  421 ILRNIDFLFS MPEISATGNN GTLFNSGVMV IEPCNCTFQL LMEHINEIES YNGGDQGYLN 480
  481 EVFTWWHRIP KHMNFLKHFW IGDEDDAKRK KTELFGAEPP VLYVLHYLGM KPWLCYRDYD 540
  541 CNFNSDIFVE FATDIAHRKW WMVHDAMPQE LHQFCYLRSK QKAQLEYDRR QAEAANYADG 600
  601 HWKIRVKDPR FKICIDKLCN WKSMLRHWGE SNWTDYESFV PTPPAITVDR RSSLPGHNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle