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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: B120_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFFRKTSLY LSLFLYFFLY ESSMAANTIR RGESLRDGIN HKPLVSPQKT FELGFFSPGS  60
   61 STHRFLGIWY GNIEDKAVVW VANRATPISD QSGVLMISND GNLVLLDGKN ITVWSSNIES 120
  121 STTNNNNRVV SIHDTGNFVL SETDTDRPIW ESFNHPTDTF LPQMRVRVNP QTGDNHAFVS 180
  181 WRSETDPSPG NYSLGVDPSG APEIVLWEGN KTRKWRSGQW NSAIFTGIPN MSLLTNYLYG 240
  241 FKLSSPPDET GSVYFTYVPS DPSVLLRFKV LYNGTEEELR WNETLKKWTK FQSEPDSECD 300
  301 QYNRCGKFGI CDMKGSNGIC SCIHGYEQVS VGNWSRGCRR RTPLKCERNI SVGEDEFLTL 360
  361 KSVKLPDFEI PEHNLVDPED CRERCLRNCS CNAYSLVGGI GCMIWNQDLV DLQQFEAGGS 420
  421 SLHIRLADSE VGENRKTKIA VIVAVLVGVI LIGIFALLLW RFKRKKDVSG AYCGKNTDTS 480
  481 VVVADLTKSK ETTSAFSGSV DIMIEGKAVN TSELPVFSLN AIAIATNDFC KENELGRGGF 540
  541 GPVYKGVLED GREIAVKRLS GKSGQGVDEF KNEIILIAKL QHRNLVRLLG CCFEGEEKML 600
  601 VYEYMPNKSL DFFLFDETKQ ALIDWKLRFS IIEGIARGLL YLHRDSRLRI IHRDLKVSNV 660
  661 LLDAEMNPKI SDFGMARIFG GNQNEANTVR VVGTYGYMSP EYAMEGLFSV KSDVYSFGVL 720
  721 LLEIVSGKRN TSLRSSEHGS LIGYAWYLYT HGRSEELVDP KIRVTCSKRE ALRCIHVAML 780
  781 CVQDSAAERP NMASVLLMLE SDTATLAAPR QPTFTSTRRN SIDVNFALDS SQQYIVSSNE 840
  841 ITSTVVLGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle