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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157821105, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNEHCQDS GEYFSAATLG YFKNDTDDNP DVREDSLGDE VFDTVNSSIV SGESIRFFVN  60
   61 VNLEVQPSKS DIEAATGGCV LLHTSRKYLK LKNFEEEVRA HRDLDGFLAQ ASIILNETAT 120
  121 SLDDVLRTML NRFAQDPNHA EPDCDLDLLM AKLFTDAGGP MESKVHLLSD TIQGVTATVR 180
  181 GLQYEQSWLC IVCTMKSLQK RHVCISRLVR PQNWGENSCE VRFVILVLAP PKMKSTKTAM 240
  241 EVARTFATMF SDITFRQKLL KTRTEEEFKE ALVHQRQLLT MMMPRAAGHS MSSLHTHRHP 300
  301 RPPKCKDFFP FGKGIWVDIM RRFPVYPLDF TDGIIGKGKT VGKYVTTTLF LYFACLLPTI 360
  361 AFGSLNDENT NGAIDVQKTI AGQSIGGLLY ALFSGQPLVI LLTTAPLAIY TQVIRVICDD 420
  421 YNLDFNAFYA WTGLWNSFFL ALYAFLNLSL LMNLFKRSTE EIIALFISIT FVLDAVKGMV 480
  481 KIFWKYYYGH HYHTKRTSSL ASLLGISRSP NTSLHTALNT SFLASPIEMT TASSPISTHS 540
  541 NQATAVLSLL IMLGTLWLGY TLYQFKKSPY LHPCVRETLS DCALPIAVLS FSLISSYGFQ 600
  601 EIEMSKFRYN PSESLFEVAQ IHSLSFKAIS SAMGLGFLLS LLFFIEQNLV AALVNAPENR 660
  661 LVKGTAYHWD LLLLAIINTG LSLFGLPWIH AAYPHSPLHV RALALVEERV ENGHIYETIV 720
  721 NVKETRLTAL GASVLVGLSL LLLPFPLQWI PKPVLYGLFL YIALTSLDGN QLFSRVALLL 780
  781 KEQTSYPPTH YIRRVPQRKI HYFTGLQILQ LLLLCAFGMS SLPYMKMVFP LIMIAMIPIR 840
  841 YNLLPRIIEA KYLDVMDAEH RP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle