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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15242433, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSHTRSY PLRLYEEGKS PLQKRSMAHS CYVSQIGKIK DGLGADVWDE LKKTTLGLFI  60
   61 KFTESGFIWA AQTVHFFLTN QLRVDNIHEM WCLIDRRPIR FSLYEFENIT GLNCDMFDES 120
  121 DTGETDYKDF WNEMGVSMSV GPLFTELERV FEISKTWSLE KRMMVGRLCL LSVGVHGIHH 180
  181 GSRVPLSSAK RVLDPVAFEK YPWGRVAFDS LSRSVKIVKY DGDSYVIHGC VQTLLVWIYE 240
  241 SVPGIGEACG FRKTNLTGVP LLDWRSSRKR FNFTAFIEKE KAAHGQVRVR HMIPVSEENM 300
  301 YPQWSDSAEN HDTALDNLLK DIIHNRLKSH AWTHVAARRK RKQNQESSNE DGESKVIEST 360
  361 PADDVSHKKQ RTGKAHIKVD EEEKTSLLDI WNMLEKMNVT ISDMDKNASS RLVGLEKKVA 420
  421 CLEASVKTRF EAVETDMRVL KESQPPVVSN EAATSNNNDE YEANSNQCSW IVEEKPGSVD 480
  481 GLPIQRVVKK TVNLVKNKEA ATKVLTKKKV AKYDKKKTIV NVEKVEKPKP EMKKTVVKVE 540
  541 KVDSPKPLQK KSVAAPTTKT FDDDVVDVTD KMANKATADA LRALQEGLDN LDGITSKRRR 600
  601 VPQLAGSQKY PYVGNSTVKR IITDVPSSSS VPEHLQPVSD DQFDRLKDWL EPDFEKEGLN 660
  661 TNNFNARFYW QIMTPRNDWP TERYGWLKDY HMGAAMSLFR RRFNRDPSKY PNQRIAFLDQ 720
  721 DLISTMLKDY KQFQPDYRCF KFREYYEDQV NGTAHCEAAT NKKWFVDVDH LYAYLFVNGN 780
  781 HWVALDIDLT NKRVNVYDSI PSLTTDTEMA IQCMFVMTMI PAMLSSFIPS KQRRRSYSKL 840
  841 EWKRITKIPE NLDPGDCAIY SIKYIECLAL GKSFDGLCDE NMQSLRTKLA VEMFEEIGEN 900
  901 ARTLHSKVRR KAFKFPSLMD E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle