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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157819513, gi...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLRQIQLL LWKNWTLRKR QKIRFVVELV WPLSLFLVLI WLRNANPLYS QHECHFPNKA  60
   61 MPSAGMLPWL QGIFCNMNNP CFQNPTPGES PGTVSNYNNS ILARLYRDFQ ELFMDTPEVQ 120
  121 RLGRVWTELR TLSQLMDTLR THPERFTGRG LPIRDILKDE ETLTLFLKKN IGLSDSVAYL 180
  181 LVNSQVRMEQ FAYGVPDLEL KDIACSEALL QRFIIFSQRW GAQAVRGALC PLSQVTLQWI 240
  241 EDTLYADVDF FKLFRVLPTL LDSSSQGINL RFWGEILSDL SPRVQKFIHR PSVQDLLWVT 300
  301 RPLLQNSGPE TFTQLMGILS DLLCGYPEGG GSRVFSFNWY EDNNYKAFLG IDSTRRDPTY 360
  361 SYDKRTTWRA TKPLLMGKIL FTPDSPAARR LLKNANSTFE ELDRVRKLVK AWEEVGPQIW 420
  421 YFFEKSTQMA VIRDTLQHPT VKDFINRQLG EEGITTEAIL NFFPNGPREN QADDMTSFDW 480
  481 RDIFNITDRF LRLANQYLEC LVLDKFESYD DEVQLTQRAL SLLEENRFWA GVVFPDMYPW 540
  541 TSSLPPHVKY KIRMDIDVVE KTNKIKDRYW DSGPRADPVE DFRYIWGGFA YLQDMVEQGI 600
  601 VRSQTPAEPP IGVYLQQMPY PCFVDDSFMI ILNRCFPIFM VLAWIYSVSM TVKGIVLEKE 660
  661 LRLKETLKNQ GVSNAVIWCT WFLDSFSIMS MSIFLLTLFI MHGRILHYSD PFILFLFLLA 720
  721 FATATIMQCF LFSTFFSKAS LAAACSGVIY FTLYLPHILC FAWQDRMTAD LKTTVSLLSP 780
  781 VAFGFGTEYL VRFEEQGLGL QWSNIGKSPL EGDEFSFLLS MKMMLLDAAL YGLLAWYLDQ 840
  841 VFPGDYGTPL PWYFLLQESY WLGGEGCSTR EERALEKTEP LTEEIEDPEY PEDSFFEREL 900
  901 PGLVPGVCVK NLVKVFEPGS RPAVDRLNIT FYENQITAFL GHNGAGKTTT LSILTGLLPP 960
  961 TSGTVLIGGK DIEISLDAVR QSLGMCPQHN ILFHHLTVAE HILFYAQLKG RSWEEARLEM1020
 1021 EAMLEDTGLH HKRNEEAQDL SGGMQRKLSV AIAFVGDSKV VVLDEPTSGV DPYSRRSIWD1080
 1081 LLLKYRSGRT IIMSTHHMDE ADLLGDRIAI ISQGRLYCSG TPLFLKNCFG TGFYLTLVRK1140
 1141 MKNIQSQRCG CEGACSCTSK GFSARCPARV DEITEEQVLD GDVKELTDLV YHHVPEAKLV1200
 1201 ECIGQELIFL LPNKNFKQRA YASLFRELEE TLADLGLSSF GISDTPLEEI FLKVTEDSES1260
 1261 GSKFVGGTQQ KREHTGLRHP CSAPVEKHRQ HAQASHTCSP GQVDPPKGQP SPEPEDPGIP1320
 1321 FNTGARLILQ HVQALLVKRF HHAVRSRKDF VAQIVLPATF VFLALMLSII VPPFGEFPAL1380
 1381 TLHPWMYGHQ FTFFSMDEPN NEHLEVLADV LLNRPGFGNR CLKEEWLPEY PCGNATSWKT1440
 1441 PSVSPNITHL FQKQKWTAAH PSPACKCSTR EKLIMLPECP EGAGGLPPPQ RIQRSTEVLQ1500
 1501 DLTNRNISDY LVKTYPALIR SSLKSKFWVN EQRYGGISIG GKLPDIPISG EALVGFLSDL1560
 1561 GQMMNVSGGP VTRESSREML DFLKHLETKD NIKVWFNNKG WHALVSFLNV AHNAILRASL1620
 1621 PKDRDPEEYG ITVISQPLNL TKEQLSEITV LTTSIDAVVA ICVIFAMSFV PASFVLYLIQ1680
 1681 ERVTKAKHLQ FISGVSPTTY WMTNFLWDIM NYAVSAGLVV GIFIGFQKKA YTSTDNLPAL1740
 1741 VTLLMLYGWA VIPMMYPASF LFDVPSTAYV ALSCANLFIG INSSAITFVL ELFENNRMLL1800
 1801 RFSATLRELL IVFPHFCLGR GLIDLALSQA VTDIYAQFGE EYSANPFQWD LIGKNLVAMA1860
 1861 IEGVVYFLLT LLIQHHFFLT RWIAEPAREP VFDEDDDVAE ERQRVMSGGS KSDILKLNEL1920
 1921 TKVYSGSSSP AVDRLCVGVH PGECFGLLGV NGAGKTTTFK MLTGDTTVTS GDATIAGKSI1980
 1981 LTNISDVHQN MGYCPQFDAI DDLLTGREHL YLYARLRGVP SKEIEKVANW GIQSLGLSLY2040
 2041 ADRLAGTYSG GNKRKLSTAI ALTGCPPLLL LDEPTTGMDP QARRMLWNTI VNIIRQGRAV2100
 2101 VLTSHSMEEC EALCTRLAIM VKGTFQCMGT IQHLKYKFGD GYIVTMKIKS PKDDLLPDLN2160
 2161 PVEQFFQGNF PGSVQRERHH SMLQFQVPSS SLARIFQLLI SHKDSLLIEE YSVTQTTLDQ2220
 2221 VFVNFAKQQT ETYDLPLHPR AAGASWQAKL EGKSGRLETQ EPLPAGSSEH LANINNPTAV2280
 2281 ADNKHTRSPQ 

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