YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149017723
Protein type: Globular with Signal Peptide
Type Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLITLCYLYL WARWGRRPAA LVLSTVRRLR ASRCSFTFCR AAAQPGGARV CLSRGGRVFC  60
   61 VGESQSVDDL NKWALFLVSP FILEAEHIAF VTESIWVQGT SFQEPSSSET VVKWSDCCLP 120
  121 LACRPGDPYQ LIAKASVDNF SKLGVAFMED RLQMDNGLIA QKIVSVHLKD PALKELSKAS 180
  181 NKQVQAPLPS PEASLEAQPA QGVMEQAGQG DWKAAGEGPS PQRRGCAPVS ESAADGDPGQ 240
  241 GSTELCQLHL SSCHECLELE NSTIESVRCA SAENIPDLPH DCSSSVEGTA GELCPERKGK 300
  301 RVNISGKAPN ILLYVGSGSE EALGQLQQVR SVLTDCVDTD SYTLYHLLED SALRDPWPDN 360
  361 CLLLVIASRD PIPKGIHHRF MAYLSQGGKV LGLSSSFTFG DLRVARRDVL RNTAQNLVFS 420
  421 KADGSEVRLS VLSSGYVYEE GPSLGRLQGH LENEDKDKMI VHVPFGTHGG EAILCQVHLE 480
  481 LPPSAPLVQT TDDFNVLKSS NTRRLEVLKE ILTALGLSCD APQAPALTPL YLLLAAEEIQ 540
  541 GPFMQWLARH VDPEGVIKSS KLSLKFVSSY TSEAEITPSS IPVVTDPEGF SSEHFNLETY 600
  601 RQNLQSTRLG RVILFAEVTS TTMSLLDGLM FEMPQEMGLI AIAVRQTQGK GRGPNAWLSP 660
  661 VGCALSTLLV SIPLRSQLGQ RIPFVQHLMS LAVVEAVRSI PEYEDINLRV KWPNDIYYSD 720
  721 LMKIGGVLVN STLVGETFYI LIGCGFNVTN SNPTICINDL IEEHNKQNKA GLKPLQADCL 780
  781 IARAVTVLEK LIDRFQDQGP DGVLPLYYKY WAHSGQQVRL GSSEGPAVSI VGLDDSGFLQ 840
  841 VHQEGGGVVS VHPDGNSFDM LRNLIVPKRP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle