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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4662631, gi|2...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSNRSNLFL HLLLLHLPTL IQALNTDGVA LLSFKYSILN DPLLVLRNWN YDDETPCSWT  60
   61 GVTCTELGIP NTPDMFRVTS LVLPNKQLLG SVSPDLFSIL HLRILDLSDN FFHGSLPDSV 120
  121 SNASELRILS LGNNKVSGEL PRSISNVASL QLLNLSANAL TGKIPPNLSL PKNLTVISLA 180
  181 KNSFSGDIPS GFEAVQVLDI SSNLLDGSLP PDFRGTSLLY LNLSNNQISG MISPPFAEKF 240
  241 PASAIIDLSF NNLTGPIPNT PPLLNQKTES FSGNIGLCGQ PLKTLCSIPS TLSDPPNISE 300
  301 TTSPAIAVMP TTPTPTNSST ESTNQTAKSK LKPSTIIGIT LADIAGLAII AMFILYIYQL 360
  361 KKRRSYQEYS TFNVLQKCLE KNDTLSVKKS KHNVADALEF TKSPPAKMGC GSWISRRYEE 420
  421 TTSVSSESDI ENQKPVEAFD RTGGGRVKHN TETQLVTVDG ETQLELDTLL KASAYVLGTN 480
  481 RSDGIVYKAV LENGAAFAVR RIGAESCPAA KFKEFEKEVQ GIAKLRHPNL VRVRGFVWGK 540
  541 EEKLLISDYV PNGNLPLSSI SAKSSSFSHK PLSFEARLKL ARGIARGIAY IHDKKHVHGN 600
  601 IKANNILLDS EFEPVITDMG LDRIMTSAHL LTDGPLSSLQ DQPPEWSTSQ KPNPKWDVYS 660
  661 FGVILLELLT GIVFSVDRDL VRDSETDEKS WFLKLVDGEI RVEVAHREDE AVACLKLGYE 720
  721 CVSSLPQKRP SMKEVVQVLE KMFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle