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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157819949, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEAMCRPR PRGVALQEAV MLLLYFGVHF RVPTGHSYNL DPESALLYQG PSGTLFGYSV  60
   61 VLHSHGTKRW LIVGAPTASW LANASVVNPG AIYRCRIGKN PNQICEQLQL GSPSGEPCGK 120
  121 TCLEERDNQW LGVTISRQPG ENGSIVTCGH RWKNIFYMKN NNKLPTGVCY GMPSDLRTEL 180
  181 SKRMAPCYQD FVRKFGENFA SCQAGISSFY TQDLIVMGAP GSSYWTGSVF VYNITTNKYK 240
  241 AFVDRQNQVK FGSYLGYSVG AGHFRNPHTT EVVGGAPQHE QIGKAYIFSI DESELTIVYE 300
  301 MKGKKLGSYF GASVCAVDLN ADGFSDLLVG APMQSTIREE GRVFVYINSG MGAVMVEMER 360
  361 VLVGSDKYAA RFGESMANLG DIDNDGFEDI AIGAPQEDDL RGAVYIYNGR VDGISSTYSQ 420
  421 RIEGRQISQS LRMFGQSISG QIDADNNGYV DVAVGAFQSD SAVLLRTRPV VIVEASLSHP 480
  481 ESVNRTKFDC TENGLLSVCV DLKLCFSYKG KEVPGYIVLF YNVSLDVHRK AESPSRFYFF 540
  541 SNGTSDMITR SIRVSSSGEK CRTHQAFMRK DVRDILTPIQ VEATYHLGHH VITKRNTEEF 600
  601 PPLQPILQQK KEKDIIRKTI NFARFCAYEN CSADLQVSAK VGFLKPYENK TYLAVGSMKT 660
  661 IMLNVSLFNA GDDAYETTLN VQLPTGLYFI KILDLEEKQI NCDVTESSGV VKLACSLGYI 720
  721 YVDRLSRIDI SFLLDVSSLS RAHEDLSINV HASCENEGKL DQVKDNRVTL VIPLRYEVML 780
  781 AVHGFVTPTS FVYGSSEENE PEMCMAEKLN LTFHVINTGI SMAPNVSVKI MVPNSFLPRN 840
  841 DKLFNVLDVQ ATMGQCQFEH YGRECALAQQ KGIAGTLTDL VKFLSKTDKR LLYCMKADRH 900
  901 CLDFLCNFGK MESGKEASVH IQLEGRPSVL EMDETSSLKF EIKATAFPEP HPKVIELNKD 960
  961 ENIAHVYLEG LHHQRPKRHF TIVIVTISLL LGLIVLLLIS CVMWKAGFFK RQYKSILQEE1020
 1021 NRRDSWSYVN SKSNDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle