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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB17G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQRDAVIDV DESEIPPIPF VLAFNDLTYN VTLQQRFGLR FGHSPAKIKT LLNGITGEAK  60
   61 EGEILAILGA SGAGKSTLID ALAGQIAEGS LKGTVTLNGE ALQSRLLRVI SAYVMQEDLL 120
  121 FPMLTVEETL MFAAEFRLPR SLSKSKKRNR VETLIDQLGL TTVKNTVIGD EGHRGVSGGE 180
  181 RRRVSIGTDI IHDPIVLFLD EPTSGLDSTS AFMVVQVLKK IARSGSIVIM SIHQPSGRIM 240
  241 EFLDRVIVLS SGQIVFSDSP ATLPLFFSEF GSPIPEKENI AEFTLDLIKD LEGSPEGTRG 300
  301 LVEFNRNWQH RKLRVSQEPH HNSSSLGEAI NASISRGKLV STSYRSIPSY VNPWWVETVI 360
  361 LAKRYMINWT RTPELIGTRV FIVMMTGFLL ATVYWKVDDS PRGVQERLSF FSFAMATMFY 420
  421 SCADGLPAFI QERYIFLRET AHNAYRRSSY VISHSLVTLP HLFALSIGFA ATTFWFVGLN 480
  481 GGLAGFIYYL MIIFASFWSG CSFVTFVSGV IPNVMMSYMV TFGYLSYCLL FSGFYVNRDR 540
  541 IHLYWIWIHY ISLLKYPYEA VLHNEFDDPS RCFVRGNQVF DNTIMEGVSE TTKAKLLETM 600
  601 SGYLGMELTE STCLTTGSDL LKQHGIEQLD KWGCLWVTLA WGFFFRILFY FSLLLGSKNK 660
  661 RA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle