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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149056132, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWAQLLPLL WAGSLAVENY ELSLTESVTV QEGLCVFVPC QVKYPASGGS VFGYWFQDGA  60
   61 NTNLNSPVAT NDPHRPVQQE TQGRFYLVGG IDTKNCSLDI RDARKSDTGK YFFRLDGSVK 120
  121 YSFRNRMLSV HVTALTKTPN LQVTSTLVSG TSTRVICSVL WACEQGTPPI FSWMSSALTS 180
  181 LGRRTILSSE LNLTPRPQDN GTNLICQVTF PGAGVTVERT QQLSVTYAPQ KLTIRVSWGD 240
  241 GTETKVLQSG ASLQIQEGES LRLVCVADSN PSAMLSWKRQ TQKNFRLSKG DELQLPRVEL 300
  301 EDQGKYICQA KNSLGTQTAS VSLSIRSLLQ LLAPSCSWDS EGLHCSCSSR AWPAPSLGWR 360
  361 LGEGLLEGNS SNASFTVMSS SAGPWVNSSL SLSVEFSTDH RLSCEAWNDY GVQRATIVLV 420
  421 PGQGVSQDKS ETSGGAVQGA IWGAGLMALL AVSFCLIFFI VKFLRKKSAL EVAAMEGNHL 480
  481 AKNLVSTINS ASMISSNIPL RYPIQDHLNE SESQTQKEEP PLATAPDIPK DEPELHYASL 540
  541 SFQGPRPQQP KNTETIKSVY TEIKIHKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle