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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8778548, gi|2...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMELSLVRLW NTCFPSFFYI STVLFLLTGG GVYSHSEYLI GLGSYDITGP AADVNMMGYA  60
   61 NMEQVASGIH FRLRARTFIV SEPQGKRVVF VNLDACMASQ IVKLKVIERL KARYGDLYTE 120
  121 QNVGISGIHT HAGPGGYLQY VVYIVTSLGF VRQSFDALVD GIENSIIQAH ENLRPGSIFL 180
  181 NNGELLDAGV NRSPSAYLNN PSKERSKHKY NVDKEMTLLK FVDDQWGPVG SFNWFATHGT 240
  241 SMSRTNSLIS GDNKGAASRF MEDWYEQNTA ERSYSEEFIS DEIPRRVSSL IENHQDSHHE 300
  301 LLELASYFES QPGKPVTRIS SSARRVRSAL RKADKPGFVS AFCQTNCGDV SPNVLGAFCL 360
  361 DTGLPCDFNH STCGGKNEMC YGRGPGYPDE FESTRIIGER QFKMALELFN KASEQLQGKV 420
  421 DYRHVYVDFS QLNVTLPKKD GKSEVVKTCP AAMGFAFAAG TTDGPGAFDF TQGDDKGNPF 480
  481 WRLVRNVLKT PDKKQIDCHY PKPILLDTGE MTKPYDWAPS ILSLQVLRIG QLFILSVPGE 540
  541 FTTMAGRRLR YAVKTQLKNS GNKDLSGEIH VVIAGLANGY SQYVTTFEEY QVQRYEGAST 600
  601 LYGPHTLSGY IQEFKKLSKS LVLDMPVQPG PQPPDLLDKQ LSFLTPVMMD TTPSGDSFGD 660
  661 VISDVPKNLS LKRGNGQVTV VFRSACPRND LLTEGTFTLV ERLEQKDKTW TPVYDDDDLC 720
  721 LRFKWSRHKK LSSRSQATVE WRIPESASPG VYRITHFGAA KKLFGQRVQN GVKELMLRSL 780
  781 MESNIPFHVN VHIQFKYPGI GNYGCVSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle