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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7438018, gi|3...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVLVTGGV VSGLGKGITA SSVGVLLQSC GLRVTCIKID PYLNYDAGTI SPYEHGEVFV  60
   61 LDDGSEVDLD LGNYERFLDT TLTRDNNITY GKIQRYVMEK ERKGDYLGET VQIVPHVTDT 120
  121 IREWVERVAM IPVDGKEGPP DVCIIELGGT IGDNESRPFA DALSQLSYSV GRENFCLIHV 180
  181 TLVPVLSVVG EQKTKPTQHS IKDLRGFGLT PNIIACRSTK ALEENVKAKL SRFCYVPIQN 240
  241 IFSLCDVPNI WHIPLLLKEQ KAHEAISKVL NLSGIAKEPS LEKWASMVEI SDGLNVPVRI 300
  301 AIVGKYTDLS DAYLSVLKAL LHASVAFHKK LEVDMVPSCD LEKTKKQEDS RAYEAAWKLL 360
  361 KDANGVLLPG GFGDRGVEGM ILAAKYAREN NIPFLGICLG MQIAVIEFAR SLLCLPDANS 420
  421 TEFEPETKHP CIIFMPEGSI THMGGTMRLG SRRAYFHDKE SKSARLYGNK EFVDERHRHR 480
  481 YEVNPDMVAS LEQAGLSFAA KDETGERMEI VELPSHPFFI GAQFHPEYKS RPRKVSPLFL 540
  541 GLIAASCGEL DAVLNPVSIH QHNQTMFLEK KQHIGWSKKC FGDKNQQEEI SETSFPM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle