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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12324934, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTFLSPHP VFLSLTGTTS SFSYKPVLLP FSRNSRTLTV AAGPARRNSY PNPADDDPPE  60
   61 APEDSMHGVS KFQQIQRQAA RARKLEEEDF EKNRNTYLSA IADVEDAAET GRDDEESGGD 120
  121 LFSDIDRAIS MKRSEFVKQG LLKPNPPKTA SLKKIGEEGN EEEGDVTDDV DELDEEEVVD 180
  181 LDEIDKLTGL TEISDEEDWV DEEGNTRINK KKEFGSDHQF EFDLDDFGES KARIVEPKFK 240
  241 MCLAELLDES KVVPISVYGD LDVEITGIQH DSRGVSAGDL FVCCLGSENF LSEADKRGAV 300
  301 AVVASKEIDI EDTLGCRALV IVEDTNAVLA ALASSFYRHP SKNMSVIGVT GTDGKTTTTY 360
  361 LIKSLYEAMG VRTGMFSTVS CYIHGDNKLD TPNATMNPDA VLVQSLMAKM LHNGTESLVM 420
  421 EASPQELALG KCDEVDFDIA VFTNLTRENT DFRGTDEEYR DAEAKLFSRM VDPERHRKVV 480
  481 NIDDPNAAFF VQQGNPNVPV VTFAMENTKA DVHPLKFELS LFETQVLVNT PQGILEISSG 540
  541 LLGRHNIYNI LAAVAVGIAV GAPLEDIVRG VEEVDAVPGR CELIDEEQAF GVIVDHANTP 600
  601 DGLSRLLDSI RELKPRRIIT VIGCEGENER GKRPLMTKIA TEKSDVTMLT SDNPRNEDPL 660
  661 DILDDMLSGI GWTMQEYLKH GEHDYYPPLA NGHRLFLHDI RRVAVRCAVA MGEEGDMVVV 720
  721 AGKGHEAYQL EGEKKEFYDD REECREALQY VDELHQAGID TSEFPWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle