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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FAO1_ARATH
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGRRLGKR GSPLLRWSVK QESFSHGFSK SDLQALSSIC DAIMPPVPLE SLNLEMKLKV  60
   61 LRNDALLSFF KSSSSESHVR PDEVVAELLA TKAIPLTVLV VRIVLRILTF RLGTLLLCGE 120
  121 KVLQRWNTQW YNPLARIGFM MIKAIFLFYY FTWTNENSEN PVWDAINYSV EIGENEDMEQ 180
  181 KERPLDEGII ETAKEDEMTI KQRMINKGLK VTEDRERDTY KIECDAVVVG SGCGGGVAAA 240
  241 ILAKSGLRVV VIEKGNYFAP RDYSALEGPS MFELFESNSL MMTHDGRFRF MAGSTVGGGS 300
  301 VVNWAASLKT PDAIIEEWSV HRGISIYSSE KYKAAMGIVC KRLGVTEKII REGFQNQILR 360
  361 KGCEKLGLDV TIVPRNSTEK HYCGSCSYGC PTGEKRGTDS TWLVDAVNNN AVILTQCKAE 420
  421 KLILADNDAN KREESGRRKR CLGVAASLSH QTRKKLQINA KVTIVACGSL KTPGLLASSG 480
  481 LKNSNISRGL HIHPIMMAWG YFPEKNSELE GAAHEGEIVT SLHYVHPMDS TTPNITLETP 540
  541 AIGPGTFAAL TPWVSGSDMK ERMAKYARTA HIFAMVRDEG VGEVKGDIVK YRLTKADEEN 600
  601 LTIGLKQALR ILVAAGAAEV GTYRSDGQRM KCDGIKQKDL EAFLDTVNAP PGVVSMSKHW 660
  661 TQSFTAHQIG CCRMGATEKE GAIDGKGESW EAEDLYVCDA SVLPTALGVN PMITVQSTAY 720
  721 CISNRIAELM KKRKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle