YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C94C1_ARATH
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLIISFTIV SFFFIIIFSL FHLLFLQKLR YCNCEICHAY LTSSWKKDFI NLSDWYTHLL  60
   61 RRSPTSTIKV HVLNSVITAN PSNVEHILKT NFHNYPKGKQ FSVILGDLLG RGIFNSDGDT 120
  121 WRFQRKLASL ELGSVSVRVF AHEIVKTEIE TRLLPILTSF SDNPGSVLDL QDVFRRFSFD 180
  181 TISKLSFGFD PDCLRLPFPI SEFAVAFDTA SLLSAKRALA PFPLLWKTKR LLRIGSEKKL 240
  241 QESINVINRL AGDLIKQRRL TGLMGKNDLI SRFMAVVAED DDEYLRDIVV SFLLAGRDTV 300
  301 AAGLTGFFWL LTRHPEVENR IREELDRVMG TGFDSVTARC DEMREMDYLH ASLYESMRLF 360
  361 PPVQFDSKFA LNDDVLSDGT FVNSGTRVTY HAYAMGRMDR IWGPDYEEFK PERWLDNEGK 420
  421 FRPENPVKYP VFQAGARVCI GKEMAIMEMK SIAVAIIRRF ETRVASPETT ETLRFAPGLT 480
  481 ATVNGGLPVM IQERS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle