YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FH8_ARATH
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP  60
   61 SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC IIARRRRDRV GPVRVENTLP 120
  121 PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI 180
  181 VTGEEEDEKE VIYYKNKKKT EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP 240
  241 PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET 300
  301 SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN 360
  361 PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND FVPDTLERLA RIAPTKEEQS 420
  421 AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC 480
  481 KELRSRGLFV KLLEAILKAG NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV 540
  541 EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS 600
  601 EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV 660
  661 KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR DFLAMVDKVC LDIMRNMQRR 720
  721 KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle