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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRK51_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLLFLVLF FVPESVVCQR PNPNGVEFNT SGNMYTSGSA YINNNGLIRL TNSTPQTTGQ  60
   61 VFYNDQLRFK NSVNGTVSSF STTFVFSIEF HNGIYGGYGI AFVICPTRDL SPTFPTTYLG 120
  121 LFNRSNMGDP KNHIVAVELD TKVDQQFEDK DANHVGIDIN TLVSDTVALA GYYMDNGTFR 180
  181 SLLLNSGQPM QIWIEYDSKQ KQINVTLHPL YVPKPKIPLL SLEKDLSPYL LELMYVGFTS 240
  241 TTGDLTASHY ILGWTFKMNG TTPDIDPSRL PKIPRYNQPW IQSPNGILTI SLTVSGVIIL 300
  301 IILSLSLWLF LKRKKLLEVL EDWEVQFGPH RFAFKDLHIA TKGFKDTEVL GKGGFGKVYK 360
  361 GTLPVSNVEI AVKMVSHDSR QGMREFIAEI ATIGRLRHPN LVRLQGYCRH KGELYLVYDC 420
  421 MAKGSLDKFL YHQQTGNLDW SQRFKIIKDV ASGLYYLHQQ WVQVIIHRDI KPANILLDAN 480
  481 MNAKLGDFGL AKLCDHGTDP QTSHVAGTLG YISPELSRTG KASTRSDVFA FGIVMLEIAC 540
  541 GRKPILPRAS QREMVLTDWV LECWENEDIM QVLDHKIGQE YVEEQAALVL KLGLFCSHPV 600
  601 AAIRPNMSSV IQLLDSVAQL PHNLLDIVQT REVHRGTEIS GEAADSPESC SIAPLTFTES 660
  661 FVSHGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle