YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENT2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	18	0.92
Transmembrane Helix	19	40	0.89
Non-Cytoplasmic	41	53	0.81
Transmembrane Helix	54	73	0.92
Cytoplasmic	74	84	0.89
Transmembrane Helix	85	105	0.93
Non-Cytoplasmic	106	110	0.83
Transmembrane Helix	111	132	0.91
Cytoplasmic	133	145	0.82
Transmembrane Helix	146	168	0.88
Non-Cytoplasmic	169	182	0.87
Transmembrane Helix	183	205	0.91
Cytoplasmic	206	259	0.94
Transmembrane Helix	260	280	0.92
Non-Cytoplasmic	281	295	0.78
Transmembrane Helix	296	315	0.93
Cytoplasmic	316	327	0.90
Transmembrane Helix	328	349	0.85
Non-Cytoplasmic	350	355	0.63
Transmembrane Helix	356	379	0.74
Cytoplasmic	380	391	0.65
Transmembrane Helix	392	412	0.95
Non-Cytoplasmic	413	417	0.75

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSILAVTT NPKGKNYALA VCWLLGVGCL LAWNSMLTIV DYYAYLFPWY HPSRILTIIY  60
   61 QSFSIGALSV LVHKEARLNT RRRNLFGYSL FSLGSLAVLV LNLATSGRGG IGSFIGVCVI 120
  121 SAAFGLADAH VYGGMIGDLS MMTPEFLQSF LAGLAASGAL TSGLRLVIKA AFKNSRDGLR 180
  181 KGATLFFAMS ASFELVCVLL YAYVFPRIPV VKYYRAKAII QGSRTVWADL AAGGIQVQPI 240
  241 TQDEEALRYD HRLNKGDLML LYSDLAVTLF LVYLLTFSIF PGFLSEDTGK YSLGDWYALV 300
  301 LIAVFNVSDL VGRYVPMVKK LKMKSRKCLL ITSLGRLLLI PAFNITGIYG SQGWMIFLMS 360
  361 VLGLSNGYLT VCVITSAPYD LLAPEQNALG NLLVLYICGG MFAGVACDWL WLVGKDW