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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ERDL6_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRDDNEEA RNDLRRPFIH TGSWYRMGSR QSSMMGSSQV IRDSSISVLA CVLIVALGPI  60
   61 QFGFTCGYSS PTQAAITKDL GLTVSEYSVF GSLSNVGAMV GAIASGQIAE YIGRKGSLMI 120
  121 AAIPNIIGWL CISFAKDTSF LYMGRLLEGF GVGIISYTVP VYIAEIAPQN MRGGLGSVNQ 180
  181 LSVTIGIMLA YLLGLFVPWR ILAVLGILPC TLLIPGLFFI PESPRWLAKM GMTDEFETSL 240
  241 QVLRGFETDI TVEVNEIKRS VASSTKRNTV RFVDLKRRRY YFPLMVGIGL LVLQQLGGIN 300
  301 GVLFYSSTIF ESAGVTSSNA ATFGVGAIQV VATAISTWLV DKAGRRLLLT ISSVGMTISL 360
  361 VIVAAAFYLK EFVSPDSDMY SWLSILSVVG VVAMVVFFSL GMGPIPWLIM SEILPVNIKG 420
  421 LAGSIATLAN WFFSWLITMT ANLLLAWSSG GTFTLYGLVC AFTVVFVTLW VPETKGKTLE 480
  481 ELQSLFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle