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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP9_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLILKFMLL ILLVSSHHVR SGSIVKFLPG FKGPLPFELE TGYIGIGEEE NVQFFYYFIK  60
   61 SDKNPQEDPL IIWLNGGPGC SCLSGLFFEN GPLALKNKVY NGSVPSLVST TYSWTKTANI 120
  121 IFLDQPVGSG FSYSKTPIER TSDTSEVKKI HEFLQKWLIK HPQFLSNPFY VVGDSYSGMI 180
  181 VPALVHEISK GNYICCNPPI NLQGYVLGNP ITHIEFEQNF RIPYAHGMSL ISDELYESLK 240
  241 RICKGNYFSV DPSNKKCLKL VEEYHKCTDN INSHHTLIAN CDDSNTQHIS PDCYYYPYHL 300
  301 VECWANNESV REALHVDKGS IGEWIRDHRG IPYKSDIRSS IPYHMNNSIN GYRSLIFSGD 360
  361 HDITMPFQAT QAWIKSLNYS IIDDWRPWMI KGQIAGYTRT YSNKMTFATV KGGGHTAEYL 420
  421 PEESSIMFQR WISGQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle