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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RH53_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITTVLRRSL LDASKRNLSA SLTSINTVLF HNLAPAATRV SDLALIGSSD VKAGFPFGVE  60
   61 AKGIHFQSGP LDFRASMVSQ AGFAISESSE RRVGDSESVG GDGLAISELG ISPEIVKALS 120
  121 SKGIEKLFPI QKAVLEPAME GRDMIGRART GTGKTLAFGI PIIDKIIKYN AKHGRGRNPL 180
  181 CLVLAPTREL ARQVEKEFRE SAPSLDTICL YGGTPIGQQM RQLDYGVDVA VGTPGRVIDL 240
  241 MKRGALNLSE VQFVVLDEAD QMLQVGFAED VEIILEKLPE KRQSMMFSAT MPSWIRSLTK 300
  301 KYLNNPLTVD LVGDSDQKLA DGITTYSIIA DSYGRASIIG PLVTEHAKGG KCIVFTQTKR 360
  361 DADRLSYALA RSFKCEALHG DISQSQRERT LAGFRDGHFN ILVATDVAAR GLDVPNVDLI 420
  421 IHYELPNNTE TFVHRTGRTG RAGKKGSAIL IYSQDQSRAV KIIEREVGSR FTELPSIAVE 480
  481 RGSASMFEGI GSRSGGSFGG GMRDRGSSFG GRSGGGGYGG SSGGYGGGRS GGSSNRYSGD 540
  541 SDRSGFGSFG MRSPEGYGSD RSSQSGGRSS FGGGRSGGSS NNRSSGFGDF GSDRSSQSGG 600
  601 RSSFGGFGSN DGKRSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle