YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PR1G2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPSPPPITY ISIPLPTNDV VSRSIHNLTT AISSHRPWSE LIFSGDFSLP ESFSSLLLRS  60
   61 KTNFNYFFVN YTIIVSTCAA FALITASPVA LIVVGAIIAL WLIFHFFRED PLILWSFQVG 120
  121 DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL 180
  181 IGSNLR

Type	Start	End	Confidence
Cytoplasmic	1	63	0.92
Transmembrane Helix	64	84	0.85
Non-Cytoplasmic	85	88	0.66
Transmembrane Helix	89	107	0.92
Cytoplasmic	108	118	0.73
Transmembrane Helix	119	138	0.88
Non-Cytoplasmic	139	141	0.77
Transmembrane Helix	142	162	0.88
Cytoplasmic	163	186	0.86