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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT13_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKNPLQKP FLFIILSINL IFLQAETTTQ ISTKKTYVIH MDKSAMPLPY TNHLQWYSSK  60
   61 INSVTQHKSQ EEEGNNNRIL YTYQTAFHGL AAQLTQEEAE RLEEEDGVVA VIPETRYELH 120
  121 TTRSPTFLGL ERQESERVWA ERVTDHDVVV GVLDTGIWPE SESFNDTGMS PVPATWRGAC 180
  181 ETGKRFLKRN CNRKIVGARV FYRGYEAATG KIDEELEYKS PRDRDGHGTH TAATVAGSPV 240
  241 KGANLFGFAY GTARGMAQKA RVAAYKVCWV GGCFSSDILS AVDQAVADGV QVLSISLGGG 300
  301 VSTYSRDSLS IATFGAMEMG VFVSCSAGNG GPDPISLTNV SPWITTVGAS TMDRDFPATV 360
  361 KIGTMRTFKG VSLYKGRTVL PKNKQYPLVY LGRNASSPDP TSFCLDGALD RRHVAGKIVI 420
  421 CDRGVTPRVQ KGQVVKRAGG IGMVLTNTAT NGEELVADSH MLPAVAVGEK EGKLIKQYAM 480
  481 TSKKATASLE ILGTRIGIKP SPVVAAFSSR GPNFLSLEIL KPDLLAPGVN ILAAWTGDMA 540
  541 PSSLSSDPRR VKFNILSGTS MSCPHVSGVA ALIKSRHPDW SPAAIKSALM TTAYVHDNMF 600
  601 KPLTDASGAA PSSPYDHGAG HIDPLRATDP GLVYDIGPQE YFEFLCTQDL SPSQLKVFTK 660
  661 HSNRTCKHTL AKNPGNLNYP AISALFPENT HVKAMTLRRT VTNVGPHISS YKVSVSPFKG 720
  721 ASVTVQPKTL NFTSKHQKLS YTVTFRTRFR MKRPEFGGLV WKSTTHKVRS PVIITWLPPL 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle