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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|123998994, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSSALCVF GLLVLVQAQS ELQQPKIELR LAGDKRKHYE GRLEVFYNNE WGTVCDDDFS  60
   61 IEAAHVACRQ LGFLGAVAWS PSAKFGQGEG RIWLDNVHCT GRENSLAACP SNGFGVSDCR 120
  121 HSEDVGVICN QKRIPGHRFI NIMNNNIETL EERVEEIRIR PISSHLKRIP ITEGYVEVKE 180
  181 WGKWRQICDE EWTPLNSRVV CGMYGFPGEK NYNNKVYRSL SMRKKKNYWG FLVNCTGNEA 240
  241 HMSSCRLGKA LEPKRNGTCG RGLPVVVSCV PGRAFAPSSS IGFRKAYRPE QPLVRLRGGA 300
  301 NVGEGRVEVL KNGVWGTVCD DNWNLKAATV VCRELGFGSA KEALTGAKLG QGMGPVHMNE 360
  361 VECSGFEKSL TDCYFNNDAL GCSHEEDAAV RCNVPAMGFQ KRIRLSGGRN PFEGRVEVLA 420
  421 EKNGSLVWGT VCSENWGIIE AMVVCRQLGL GFASHAFQET WYWAGDANAD NVVMSGVRCS 480
  481 GTEMSLPQCL HHGKHINCPK GGGRFAAGVS CSDTAPDLVL NAQLVEQTTY LEDRPMYALQ 540
  541 CALEENCLSS TARKNDHSSY RRLLRFSSQI HNVGQSDFRP KLGYHAWTWH ECHRHYHSME 600
  601 VFTHYDLLSL NGTKVAEGHK ASFCLEDTHC DEGISKRYHC ANFGEQGITV GCWDTYRHDI 660
  661 DCQWIDVTDV KPGDYIFQVV INPNYDVAES DYTNNVMKCK CRYDGYRIWT YSCHIGGSRS 720
  721 SDMDEYSGMS NQLNHLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle