YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA20_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKVLGLVAI LLIVLAGNVL SYDRQGTRKN LVIHPTNEDD PTFPDQVHIS LVGPDKMRIS  60
   61 WITQSSISPS VVYGTVSGKY EGSANGTSSS YHYLLIYRSG QINDVVIGPL KPNTVYYYKC 120
  121 GGPSSTQEFS FRTPPSKFPI KFAVSGDLGT SEWSKSTLEH VSKWDYDVFI LPGDLSYANM 180
  181 YQPLWDTFGR LVQPLASQRP WMVTHGNHEL EKIPILHSNP FTAYNKRWRM PFEESGSSSN 240
  241 LYYSFNVYGV HIIMLGSYTD FEPGSEQYQW LENNLKKIDR KTTPWVVAVV HAPWYNSNEA 300
  301 HQGEKESVEM KESMETLLYK ARVDLVFAGH VHAYERFSRV YQDKFDKCGP VYINIGDGGN 360
  361 LEGLATKYRD PNPEISLFRE ASFGHGQLVV ENATHARWEW HRNDDDVSVE KDSVWLTSLL 420
  421 ADSSCKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle