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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RMR1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVVSSCLL VAAPFLSSLL RVSLATVVLN SISASFADLP AKFDGSVTKN GICGALYVAD  60
   61 PLDGCSPLLH AAASNWTQHR TTKFALIIRG ECSFEDKLLN AQNSGFQAVI VYDNIDNEDL 120
  121 IVMKVNPQDI TVDAVFVSNV AGEILRKYAR GRDGECCLNP PDRGSAWTVL AISFFSLLLI 180
  181 VTFLLIAFFA PRHWTQWRGR HTRTIRLDAK LVHTLPCFTF TDSAHHKAGE TCAICLEDYR 240
  241 FGESLRLLPC QHAFHLNCID SWLTKWGTSC PVCKHDIRTE TMSSEVHKRE SPRTDTSTSR 300
  301 FAFAQSSQSR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle