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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25354448, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVGAPASKP GRIIVQVFLL QLLLLLQSVH SQRSQNKLNI TKPGQNIPAL TVQLRRVGHD  60
   61 TVVVDNGIVQ VTFSNPEGLI TGIKYHGIDN VLDDKIDDRG YWDVVWYEPE KKQKTDKLEG 120
  121 TKFEIITQNE EQIEISFTRT WTISRRGSLV PLNVDKRYII RSGVSGLYMY GILERLEGWP 180
  181 DVDMDQIRIV FKLNPKKFDF MAISDDRQRS MPSMADRENS KSLAYKEAVL LTNPSNPMFK 240
  241 GEVDDKYMYS MEDKDNNVHG WISSDPPVGF WMITPSDEFR LGGPIKQDLT SHAGPITLSM 300
  301 FTSTHYAGKE MRMDYRNGEP WKKVFGPVLA YLNSVSPKDS TLRLWRDAKR QMAAEVKSWP 360
  361 YDFITSEDYP LRHQRGTLEG QFLIKDSYVS RLKIYGKFAF VGLAPIGEAG SWQTESKGYQ 420
  421 FWTKADRRGR FIIENVRAGN YSLYAWGSGF IGDYKYEQNI TITPGSEMNV GPLVYEPPRN 480
  481 GPTLWEIGVP DRTAGEFYIP DPYPTLMNKL YVNPLQDRFR QYGLWDRYAD LYPQNDLVYT 540
  541 IGVSDYRSDW FFAHVARNVG NDTYQPTTWQ IIFNLKNVNR IGRYTLRIAL ASAADSELQI 600
  601 RINDPKSDAI FTTGFIGKDN AIARHGIHGL YRLYSIDVAG NLLSVGDNTI FLTQTRSRTP 660
  661 FQGIMYDYIR LESPFRT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle