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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP36_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRQDWSVT ACIFLFLSLA SQIHCRSHIP FPSPKRGVSS SGDTSHFNVI QRESVPSPKD  60
   61 KDLIQQLPGQ PSDVTFKQYG GYVAVNKPAG RFLYYYFVET IKPGNTTPLV IWFNGGPGCS 120
  121 SLGGAFKELG PFRVHSDGKT LFRNPYSWNN EANVLFLETP VGTGFSYSNS PINGKQGDKA 180
  181 TAEDNYMFLV NWLERFPEYK GRDIYIAGQS YAGHYVPQLA QIILHRNNQT LINLRGILIG 240
  241 NPSLNREIQD DFGYKFMFSH GLISQQQMDN YNKFCTDSDL YDWDKCHLAS QKIEAQKTHL 300
  301 DIYNIYAPLC LNSTLSSEPK KCTTIMKADP CSGNYLKAYL NIKEVQEAIH ANTTKIPYEW 360
  361 TSCNTKLLWE WNEKDRYVSL TPILQELMGK GVRVMLYNGD VDLVIPFTST LAVVKTMNLT 420
  421 VVKEWRPWFT GGHVGGFTED YKGNLTFVTV KGAGHSVPTD QPIHALNIFT SFIRNTPLPQ 480
  481 TA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle