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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKYFSSVL KSLLLLLHLV FLSKQHVDSA SIVKFLPGFE GPLPFELETG YIGIGEEEEV  60
   61 QLFYYFIKSE RNPKEDPLIL WLTGGPGCSS ISGLLFENGP LTMKLDVYNG TLPSLVSTTY 120
  121 SWTKTSSMIF LDQPVGTGFS YSRTQQFNKP SDSGEAKRIH EFLQKWLGKH QEFSSNPFYV 180
  181 AGDSYSGLVV PATVQEISKG NYECCNPPIN LQGYVLGNPL TDYAIDSNSR IPFAHGMALI 240
  241 SDELYESLKK TCKGEYTNVH PRNTQCLKFI EEFNKCTNRI LQQLILDPLC ETETPDCYIY 300
  301 RYLLTTYWAN DATVREALQI NKESIGEWVR CYRTIPYDND IKSSMPYHVN NSISGYRSLI 360
  361 YSGDHDLEVP YLGTQAWIRS LNYSIIDDWR PWMIKNQIAG YTRTYANKMT FATIKGGGHT 420
  421 IEFKPEEASI MFQRWINGQP L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle