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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148725462, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAAALSLL PWRGTHLSHP PQLSTLTEED EPERHKQQDE DDEEVSGVQQ DPMFQQTAYL  60
   61 LEGPEDMGVS SCGLKSPDWV YESYYRMSQQ HPLIVFLLLI VMGACLALLA VFFASGLDME 120
  121 EHMAFIMTVP TTLAIFLAIF ILVCIESVFK KLLRLFSLLI WGCLVAMGYL FMFFGGIICP 180
  181 WDQVSFFLFI VFVVYTMLPF SMRDAVIASV LTSSSHTLVL SICLSNTSDH MEALVWQILA 240
  241 NIIIFICGNV AGAYHKHLMD LALKQTYHDT CNCIKSPIKL EFEKHQQERL LLSLLPAHIA 300
  301 RVMKAEIIQR LKGPNFSQAE NTNNFHNLYV QRHTNVSILY ADIVGFTRLA SDCSPGELVY 360
  361 MLNELFGKFD QIAKDNDCMR IKILGDCYYC VSGLPDPLLD HAKNCVKMGL DMCEAIEKVR 420
  421 EATGVDINMR VGVHSGNVLC GVIGLQKWQY DVWSHDVTLA NHMEAGGVPG RVHISSVTLE 480
  481 HLNGAYKVEQ GNGQSRDSYL KEHGIVTYLV INPKAEKRSP LLLSAIRPTM YGAKMRASVR 540
  541 MTQYLESWGA AKPFANLHHR DSMTNENGMI NTRDVPLGQY NCQQRTKSQK KRFEEELNER 600
  601 IIRTIDGINS QKQWLKSEDI QRISLFFHNK ALEKEYRATT LPAFKYYVTC ACLIFFCIFI 660
  661 VQVLVLPKTT VLEVSFGMAF LLLALILCIC FAGHILQWGK AASCTMPRLP SSSKVITNKP 720
  721 WIRLALTMAT TALILVMAVF NMFFLGEDRM VASTSLNISN SSMDGPYGQI TNSSNNKFYL 780
  781 PYFIYSCILG LISCSVFLRI NYELKMIIML GAVVAYNIII LQTHASILDD YSMALYKTQQ 840
  841 PDRPGVLKDL KTMGSISLFI FFVTLLVLAR QNEYYCRLDF LWRNKFKKEC EEIETMENLN 900
  901 RVLLENVLPA HVAEHFLGRN WKNEDLYHQS YDTVCVMFAS IPDFKEFYTE SDVNKEGLEC 960
  961 LRLLNEIIAD FDELLSKPKF SGVEKIKTIG STYMAATGLN VTPGLEYAQY HDRQYMHIGT1020
 1021 MVEFAFALVG KLDVINKHSF NDFRMRVGIN HGPVIAGVIG AQKPQYDIWG NTVNVASRME1080
 1081 STGVLGKIQV TEETNWILQT LGYMCSCRGI INVKGKGDLR TFFVHTEMTQ SLSQGNVMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle