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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TGD2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGNPVIQVP SSLMPSSSMI ACPRVSPNGV PYLPPKPRTR HLVVRAASNS DAAHGQPSSD  60
   61 GGKNPLTVVL DVPRNIWRQT LKPLSDFGFG KRSIWEGGVG LFIVSGATLL ALSWAWLRGF 120
  121 QMRSKFRKYQ TVFELSHASG ICTGTPVRIR GVTVGTIIRV NPSLKNIEAV AEIEDDKIII 180
  181 PRNSLVEVNQ SGLLMETMID IMPRNPIPEP SVGPLHPECG KEGLIVCDRQ TIKGVQGVSL 240
  241 DELVGIFTRI GREVEAIGVA NTYSLAERAA SVIEEARPLL KKIQAMAEDA QPLLSEFRDS 300
  301 GLLKEVECLT RSLTQASDDL RKVNSSIMTP ENTELIQKSI YTLVYTLKNV ESISSDILGF 360
  361 TGDEATRKNL KLLIKSLSRL L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle