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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLB2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSSCSLPP LYENISYKSY ILRAVDLTIL GLLFSLLLHR ILYMSQNGII WLVAFLCESC  60
   61 FSFVWLLSTC TKWSPAETKP YPDRLDERVY DLPSVDMFVP TADPVREPPI MVVNTVLSLL 120
  121 AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFAKIWVPFC KKYNLKVRAP FRYFLNPFAA 180
  181 TEGSEFSRDW EMTKREYEKL CRKVEDATGD SHLLGTDNEL EAFSNTKPND HSTIIKVVWE 240
  241 NKGGVGDEKE VPHIVYISRE KRPNYLHHYK AGAMNFLARV SGLMTNAPYM LNVDCDMYAN 300
  301 EADVVRQAMC IFLQKSQNQN HCAFVQFPQE FYDSNTIKLT VIKSYMGRGI AGIQGPINVG 360
  361 SGCFHSRRVM YGLSPDELED NGSLSSVATR ELLAEDSLSS GFGNSKEMVT SVVEALQRKP 420
  421 NPQNILTNSI EAAQEVGHCD YESQTSWGKT IGWLYDSMSE DMNTSIGIHS RGWTSSYIAP 480
  481 DPPAFLGSMP PGGLEAMIQQ RRWATGSIEV LFNKQSPLLG LFCRKLRFRQ RVAYLCVSIC 540
  541 VRSIPELIYC LLPAYCLLHN SALFPKGLCL GITMLLAGMH CLYTLWEFMC LGHSIQSWYV 600
  601 SQSFWRIVAT SSWLFSIFDI ILKLLGLSKN VFLVSKKTMP VETMSGSGIG PSQREDDGPN 660
  661 SGKTEFDGSL YFLPGTFIVL VNLAALVGVF VGLQRSSYSH GGGGSGLGEA CACILVVMLF 720
  721 FPFLKGLFAK GKYGIPLSTL SKAGFLAVSF VVFSVGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle