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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y1649_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKRIVFFA CLLLFTVLLR FSYAGITTES PLSVEQTLSS SNGIYELGFF SPNNSQNLYV  60
   61 GIWFKGIIPR VVVWVANRET PTTDTSANLA ISSNGSLLLF NGKHGVVWSI GENFASNGSR 120
  121 AELTDNGNLV VIDNASGRTL WESFEHFGDT MLPFSSLMYN LATGEKRVLT SWKTDTDPSP 180
  181 GVFVGQITPQ VPSQVLIMRG STRYYRTGPW AKTRFTGIPL MDDTYASPFS LQQDANGSGF 240
  241 FTYFDRSFKL SRIIISSEGS MKRFRHNGTD WELSYMAPAN SCDIYGVCGP FGLCIVSVPL 300
  301 KCKCLKGFVP HSTEEWKRGN WTGGCARLTE LHCQGNSTGK DVNIFHPVTN VKLPDFYEYE 360
  361 SSVDAEECHQ SCLHNCSCLA FAYIHGIGCL IWNQNLMDAV QFSAGGEILS IRLAHSELGG 420
  421 NKRNKIIVAS TVSLSLFVIL TSAAFGFWRY RVKHKAYTLK DAWRNDLKSK EVPGLEFFEM 480
  481 NTIQTATNNF SLSNKLGQGG FGSVYKGKLQ DGKEIAVKQL SSSSGQGKEE FMNEIVLISK 540
  541 LQHRNLVRVL GCCIEGEEKL LIYEFMLNKS LDTFVFDARK KLEVDWPKRF DIVQGIARGL 600
  601 LYLHRDSRLK VIHRDLKVSN ILLDEKMNPK ISDFGLARMY EGTQCQDKTR RVVGTLGYMS 660
  661 PEYAWTGVFS EKSDIYSFGV LLLEIIIGEK ISRFSYGEEG KTLLAYAWES WGETKGIDLL 720
  721 DQDLADSCRP LEVGRCVQIG LLCVQHQPAD RPNTLELLAM LTTTSDLPSP KQPTFVVHSR 780
  781 DDESSLSKDL FTVNEMTQSM ILGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle