YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XTH9_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG  60
   61 FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN EFDFEFLGNT TGEPYIVQTN 120
  121 IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD 180
  181 QAMGVYSSIW NADDWATQGG LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF 240
  241 WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Type	Start	End	Confidence
Signal Peptide	1	26	0.91
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	290	0.99