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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: XTH30_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSSYNHIF ILILCLCLRS SSAFTNLNTL SFEESLSPLF GDANLVRSPD DLSVRLLLDR  60
   61 YTGSGFISSN MYQHGFYSSM IKLPADYTAG VVVAFYTSNG DVFEKTHDEL DIEFLGNIKG 120
  121 KPWRFQTNLY GNGSTHRGRE ERYRLWFDPS KEFHRYSILW TPHKIIFWVD DVPIREVIRN 180
  181 DAMGADYPAK PMALYATIWD ASDWATSGGK YKANYKFAPF VAEFKSFSLD GCSVDPIQEV 240
  241 PMDCSDSVDF LESQDYSSIN SHQRAAMRRF RQRFMYYSYC YDTLRYPEPL PECVIVPAEK 300
  301 DRFKETGRLK FGGTEARERR RNRRQQRRPE IEIESDPDDR KLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle