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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CPNA1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASANALSSA SVLCSSRQSK LGGGNQQQGQ RVSYNKRTIR RFSVRANVKE IAFDQHSRAA  60
   61 LQAGIDKLAD CVGLTLGPRG RNVVLDEFGS PKVVNDGVTI ARAIELPNAM ENAGAALIRE 120
  121 VASKTNDSAG DGTTTASILA REIIKHGLLS VTSGANPVSL KRGIDKTVQG LIEELQKKAR 180
  181 PVKGRDDIRA VASISAGNDD LIGSMIADAI DKVGPDGVLS IESSSSFETT VEVEEGMEID 240
  241 RGYISPQFVT NPEKLLAEFE NARVLITDQK ITAIKDIIPI LEKTTQLRAP LLIIAEDVTG 300
  301 EALATLVVNK LRGVLNVVAV KAPGFGERRK AMLQDIAILT GAEYLAMDMS LLVENATIDQ 360
  361 LGIARKVTIS KDSTTLIADA ASKDELQARI AQLKKELFET DSVYDSEKLA ERIAKLSGGV 420
  421 AVIKVGAATE TELEDRKLRI EDAKNATFAA IEEGIVPGGG AALVHLSTVI PAIKETFEDA 480
  481 DERLGADIVQ KALLSPAALI AQNAGVEGEV VVEKIMFSDW ENGYNAMTDT YENLFEAGVI 540
  541 DPAKVTRCAL QNAASVAGMV LTTQAIVVDK PKPKAPAAAA PEGLMV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle