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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RLK5_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYCLILLLC LSSTYLPSLS LNQDATILRQ AKLGLSDPAQ SLSSWSDNND VTPCKWLGVS  60
   61 CDATSNVVSV DLSSFMLVGP FPSILCHLPS LHSLSLYNNS INGSLSADDF DTCHNLISLD 120
  121 LSENLLVGSI PKSLPFNLPN LKFLEISGNN LSDTIPSSFG EFRKLESLNL AGNFLSGTIP 180
  181 ASLGNVTTLK ELKLAYNLFS PSQIPSQLGN LTELQVLWLA GCNLVGPIPP SLSRLTSLVN 240
  241 LDLTFNQLTG SIPSWITQLK TVEQIELFNN SFSGELPESM GNMTTLKRFD ASMNKLTGKI 300
  301 PDNLNLLNLE SLNLFENMLE GPLPESITRS KTLSELKLFN NRLTGVLPSQ LGANSPLQYV 360
  361 DLSYNRFSGE IPANVCGEGK LEYLILIDNS FSGEISNNLG KCKSLTRVRL SNNKLSGQIP 420
  421 HGFWGLPRLS LLELSDNSFT GSIPKTIIGA KNLSNLRISK NRFSGSIPNE IGSLNGIIEI 480
  481 SGAENDFSGE IPESLVKLKQ LSRLDLSKNQ LSGEIPRELR GWKNLNELNL ANNHLSGEIP 540
  541 KEVGILPVLN YLDLSSNQFS GEIPLELQNL KLNVLNLSYN HLSGKIPPLY ANKIYAHDFI 600
  601 GNPGLCVDLD GLCRKITRSK NIGYVWILLT IFLLAGLVFV VGIVMFIAKC RKLRALKSST 660
  661 LAASKWRSFH KLHFSEHEIA DCLDEKNVIG FGSSGKVYKV ELRGGEVVAV KKLNKSVKGG 720
  721 DDEYSSDSLN RDVFAAEVET LGTIRHKSIV RLWCCCSSGD CKLLVYEYMP NGSLADVLHG 780
  781 DRKGGVVLGW PERLRIALDA AEGLSYLHHD CVPPIVHRDV KSSNILLDSD YGAKVADFGI 840
  841 AKVGQMSGSK TPEAMSGIAG SCGYIAPEYV YTLRVNEKSD IYSFGVVLLE LVTGKQPTDS 900
  901 ELGDKDMAKW VCTALDKCGL EPVIDPKLDL KFKEEISKVI HIGLLCTSPL PLNRPSMRKV 960
  961 VIMLQEVSGA VPCSSPNTSK RSKTGGKLSP YYTEDLNSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle