YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRS6B_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAAVASMV LDPKASPALM DLSTADEEDL YGRLKSLERQ LEFTDIQEEY VKDEQKNLKR  60
   61 ELLRAQEEVK RIQSVPLVIG QFMEMVDQNN GIVGSTTGSN YYVRILSTIN RELLKPSASV 120
  121 ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL 180
  181 YKQIGIDPPR GVLLYGPPGT GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV 240
  241 FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA 300
  301 TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI 360
  361 SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP DTDFEFYK

Type	Start	End	Confidence
Signal Peptide	1	17	0.63
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	408	0.99