YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MLO4_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHMMKEGRS LAETPTYSVA SVVTVLVFVC FLVERAIYRF GKWLKKTRRK ALFTSLEKMK  60
   61 EELMLLGLIS LLLSQSARWI SEICVNSSLF NSKFYICSEE DYGIHKKVLL EHTSSTNQSS 120
  121 LPHHGIHEAS HQCGHGREPF VSYEGLEQLL RFLFVLGITH VLYSGIAIGL AMSKIYSWRK 180
  181 WEAQAIIMAE SDIHAKKTKV MKRQSTFVFH HASHPWSNNR FLIWMLCFLR QFRGSIRKSD 240
  241 YFALRLGFLT KHNLPFTYNF HMYMVRTMED EFHGIVGISW PLWVYAIVCI CINVHGLNMY 300
  301 FWISFVPAIL VMLVGTKLEH VVSKLALEVK EQQTGTSNGA QVKPRDGLFW FGKPEILLRL 360
  361 IQFIIFQNAF EMATFIWFLW GIKERSCFMK NHVMISSRLI SGVLVQFWCS YGTVPLNVIV 420
  421 TQMGSRHKKA VIAESVRDSL HSWCKRVKER SKHTRSVCSL DTATIDERDE MTVGTLSRSS 480
  481 SMTSLNQITI NSIDQAESIF GAAASSSSPQ DGYTSRVEEY LSETYNNIGS IPPLNDEIEI 540
  541 EIEGEEDNGG RGSGSDENNG DAGETLLELF RRT

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.85
Transmembrane Helix	17	38	0.91
Cytoplasmic	39	62	0.80
Transmembrane Helix	63	80	0.70
Non-Cytoplasmic	81	149	0.81
Transmembrane Helix	150	172	0.87
Cytoplasmic	173	271	0.79
Transmembrane Helix	272	306	0.72
Non-Cytoplasmic	307	357	0.57
Transmembrane Helix	358	381	0.88
Cytoplasmic	382	398	0.53
Transmembrane Helix	399	419	0.69
Non-Cytoplasmic	420	573	0.56