YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MLO13_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEARSGSLE YTPTWVVAFI CFIIVLLSLL AERGLHHLGK CLKRRQQDAL FEALQKLKEE  60
   61 LMLLGFISLM LTVSQAAIRH ICVPPALVNN MFPCKKPLEE HHAPKSSHSI INNARHLLST 120
  121 GESPDHCAAK GQVPLVSVEA LHQLHIFIFV LAVFHVIFCA STMVLGGARI QQWKHWEDWF 180
  181 KKRPSQKGTT RRGHHAHAHE LFSANHEFFE MHAGGFWRRS VVISWVRSFF KQFYGSVTKS 240
  241 EYIALRQAFI MSHCRTNPSF DFHKYMLRTL EIDFKKVVSI SWYLWLFVVV FLLLNVGGWN 300
  301 TYFWLSFLPL ILLLMVGAKL EYIISSLALD VSEKRSRAEE AVITPSDELF WFHRPGIVLQ 360
  361 LIHFILFQNS FEIAFFFWIL FTYGIHSCIM EKLGYLIPRL VMGVLVQVLC SYSTLPLYAL 420
  421 VTQMGSKFKK GIFDNVVQST LEGWLEDTRN RGESTSEAHR IEMQPTTPES YNVQSENP

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.90
Transmembrane Helix	14	35	0.90
Cytoplasmic	36	60	0.93
Transmembrane Helix	61	83	0.88
Non-Cytoplasmic	84	143	0.98
Transmembrane Helix	144	166	0.92
Cytoplasmic	167	277	0.97
Transmembrane Helix	278	299	0.85
Non-Cytoplasmic	300	304	0.59
Transmembrane Helix	305	329	0.70
Cytoplasmic	330	358	0.78
Transmembrane Helix	359	382	0.80
Non-Cytoplasmic	383	399	0.57
Transmembrane Helix	400	421	0.84
Cytoplasmic	422	478	0.76