YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MLO12_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.85
Transmembrane Helix	14	37	0.90
Cytoplasmic	38	57	0.79
Transmembrane Helix	58	77	0.80
Non-Cytoplasmic	78	153	0.96
Transmembrane Helix	154	176	0.93
Cytoplasmic	177	217	0.98
Transmembrane Helix	218	238	0.68
Non-Cytoplasmic	239	245	0.67
Transmembrane Helix	246	267	0.67
Cytoplasmic	268	278	0.91
Transmembrane Helix	279	299	0.96
Non-Cytoplasmic	300	306	0.84
Transmembrane Helix	307	328	0.91
Cytoplasmic	329	364	0.94
Transmembrane Helix	365	384	0.95
Non-Cytoplasmic	385	403	0.88
Transmembrane Helix	404	427	0.83
Cytoplasmic	428	576	0.92

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKERSLEE TPTWAVAVVC FVLLFISIMI EYFLHFIGHW FKKKHKKALS EALEKVKAEL  60
   61 MLLGFISLLL VVLQTPVSEI CIPRNIAATW HPCSNHQEIA KYGKDYIDDG RKILEDFDSN 120
  121 DFYSPRRNLA TKGYDKCAEK GKVALVSAYG IHQLHIFIFV LAVFHVLYCI ITYALGKTKM 180
  181 KKWKSWERET KTIEYQYAND PERFRFARDT SFGRRHLNIW SKSTFTLWIT CFFRQFFGSV 240
  241 TKVDYLTLRH GFIMAHLPAG SAARFDFQKY IERSLEQDFT VVVGISPLIW CIAVLFILTN 300
  301 THGWDSYLWL PFLPLIVILI VGAKLQMIIS KLGLRIQEKG DVVKGAPVVE PGDDLFWFGR 360
  361 PRFILFLIHL VLFTNAFQLA FFVWSTYEFT LKNCFHHKTE DIAIRITMGV LIQVLCSYIT 420
  421 LPLYALVTQM GTSMRPTIFN DRVANALKKW HHTAKKQTKH GHSGSNTPHS SRPTTPTHGM 480
  481 SPVHLLHNYN NRSLDQQTSF TASPSPPRFS DYSGQGHGHQ HFFDPESQNH SYQREITDSE 540
  541 FSNSHHPQVD MASPVREEKE IVEHVKVDLS EFTFKK